PI 组长：

涂晓雨  

组      员：

李传顺（生信分析科研助理）

李杨美汇（2022级博士生）

王天淼（2021级硕士生）

李亿宁（2022级硕士生）

主要项目：

1. 入选，上海海外高层次人才引进计划项目

2. 主持，国家自然科学青年基金项目（32100438）

3. 主持，中国博士后科学基金特别资助（站中）（2021T140677）

4. 主持，中国博士后科学基金面上资助（2020M672858）

 

代表性论文 (†, 共同一作; *, 通讯作者; _, Tu lab成员)：

1. Tu, X., Ren, S.^†, Shen, W.^†, Li, J.^†, Li, Y., Li, C., Li, Y., Zong, Z., Xie, W., Grierson, D., Fei, Z., Giovannoni, J., Li, P.^*, Zhong, S.^*; Limited conservation in cross-species comparison of GLK transcription factor binding suggested wide-spread cistrome divergence, Nature Communications, 2022, 13:7632

2. Tu, X., Mejía-Guerra, M.K.^†*, Valdes Franco, J.A., Tzeng, D., Chu, P., Shen, W., Wei, Y., Dai, X., Li, P.^*, Buckler, E.S., Zhong, S.^*; Reconstructing the maize leaf regulatory network using ChIP-seq data of 104 transcription factors, Nature Communications, 2020, 11:5089

3. Tu, X., Marand, A.P.^†, Schmitz, R.J.^*, Zhong, S.^*; A combinatorial indexing strategy for low-cost epigenomic profiling of plant single cells, Plant Communications, 2022, 3:100308

4. Dong, P., Tu, X.^† (共同一作), Chu, P.^†, Lü, P., Zhu, N., Grierson, D., Du, B., Li, P.^*, Zhong, S.^*; 3D chromatin architecture of large plant genomes determined by local A/B compartments, Molecular Plant, 2017, 10(12):1497-1509

5. Dong, P., Tu, X.^† (共同一作), Li, H., Zhang, J., Grierson, D., Li, P.^*, Zhong, S.^*; Tissue-specific Hi-C analyses of rice, foxtail millet and maize suggest non-canonical function of plant chromatin domains, Journal of Integrative Plant Biology, 2020, 62(2):201-217

6. Dai, X., Tu, X.^† (共同一作), Du, B., Dong, P., Sun, S., Wang, X., Sun, J., Gang, L., Lu, T.^*, Zhong, S.^*, Li, P.^*; Chromatin and regulatory differentiation between bundle sheath and mesophyll cells in maize, Plant Journal, 2022, 109(3):675-692

7. Sun, A., Yin, C., Ma, M., Zhou, Y., Zheng, X., Tu, X., Fang, Y.; Feedback regulation of auxin signaling through the transcription of H2A.Z and deposition of H2A.Z to SMALL AUXIN UP RNAs in Arabidopsis, New Phytologist, 2022, 236(5):1721-1733

8. Wang, X., Wang, X.^†*, Sun, S., Tu, X., Lin, K., Qin, L., Wang, X., Li, G.^*, Zhong, S.^*, Li, P.^*; Characterization of regulatory modules controlling leaf angle in maize, Plant Physiology, 2022, 190(1):500-515

9. Dong, P., Tu, X., Liang, Z., Kang, B., Zhong, S.^*; Plant and animal chromatin three-dimensional organization: similar structures but different functions, Journal of Experimental Botany, 2020, 71(17):5119-5128

10. Dai, X., Xu, Z., Liang, Z., Tu, X., Zhong, S., Schnable, J.C.^*, Li, P.^*; Non‐homology‐based prediction of gene functions in maize (Zea mays ssp. mays), Plant Genome, 2020, 13(2):e20015

11. Ding, Z., Weissmann, S., Wang, M., Du, B., Huang, L., Wang, L., Tu, X., Zhong, S., Myers, C., Brutnell, T.P., Sun Q.^*, Li, P.^*; Identification of Photosynthesis-Associated C₄ Candidate Genes through Comparative Leaf Gradient Transcriptome in Multiple Lineages of C₃ and C4 Species, PLOS ONE, 2015, 10:e0140629

 

招生和招聘：

硕士、博士研究生现开放申请，同时公开招聘博士后2名，竭诚欢迎各位优秀学生和青年学者加盟。